Legofit
infers population history from nucleotide site patterns.
Functions | Variables
flatfile.py File Reference

Functions

def flatfile.usage (msg1)
 
def flatfile.parselegofit (fname)
 

Variables

list flatfile.fnames = []
 
bool flatfile.transpose = False
 
int flatfile.i = 1
 
list flatfile.allmaps = []
 
 flatfile.allnames = set([])
 
def flatfile.estmap = parselegofit(name)
 
 flatfile.npar = len(allnames)
 
 flatfile.nfile = len(fnames)
 
 flatfile.mat = nfile*[None]
 
int flatfile.k = 0
 
 flatfile.nrows = npar
 
 flatfile.ncols = len(fnames)