Legofit
infers population history from nucleotide site patterns.
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Simulation schedule. More...
#include "simsched.h"
#include "misc.h"
#include <stdio.h>
#include <pthread.h>
#include <string.h>
Data Structures | |
struct | Stage |
A single stage in the optimization process. More... | |
struct | SimSched |
Holds a linked list of Stages and a mutex lock. More... | |
Functions | |
static Stage * | Stage_append (Stage *self, long nOptItr, long nSimReps) |
Append a new link to the end of the list. More... | |
static Stage * | Stage_free (Stage *self) |
Free the list and return NULL. | |
static Stage * | Stage_popHead (Stage *self) |
Delete head of the list and return a pointer to the new head. | |
static long | Stage_getSimReps (Stage *self) |
Return the number of simulation replicates of current Stage. | |
static long | Stage_getOptItr (Stage *self) |
Return the number of optimizer iterations of current Stage. | |
SimSched * | SimSched_new (void) |
Allocate a new SimSched with no stages. | |
void | SimSched_append (SimSched *self, long nOptItr, long nSimReps) |
Append a stage to a SimSched. | |
void | SimSched_free (SimSched *self) |
Free a SimSched. | |
long | SimSched_getSimReps (SimSched *self) |
Return number of simulation reps in current stage. | |
long | SimSched_getOptItr (SimSched *self) |
Return number of optimizer iterations in current stage. | |
int | SimSched_next (SimSched *self) |
void | SimSched_print (const SimSched *self, FILE *fp) |
Print SimSched. | |
int | SimSched_nStages (const SimSched *self) |
Return number of stages. | |
Simulation schedule.
SimSched implements a linked list of stages. Each stage establishes a limit on the number of optimizer iterations and on the number of simulation replicates.